123456789101112131415161718192021222324252627282930313233343536373839404142434445464748495051525354555657585960616263646566676869707172737475767778798081828384858687888990919293949596979899100101102103104105106107108109110111112113114115116117118119120121122123124125126127128129130131132133134135136137138139140141142143144145146147 |
- //=====================================================
- // File : blitz_interface.hh
- // Author : L. Plagne <laurent.plagne@edf.fr)>
- // Copyright (C) EDF R&D, lun sep 30 14:23:30 CEST 2002
- // Copyright (C) 2008 Gael Guennebaud <gael.guennebaud@inria.fr>
- //=====================================================
- //
- // This program is free software; you can redistribute it and/or
- // modify it under the terms of the GNU General Public License
- // as published by the Free Software Foundation; either version 2
- // of the License, or (at your option) any later version.
- //
- // This program is distributed in the hope that it will be useful,
- // but WITHOUT ANY WARRANTY; without even the implied warranty of
- // MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
- // GNU General Public License for more details.
- // You should have received a copy of the GNU General Public License
- // along with this program; if not, write to the Free Software
- // Foundation, Inc., 59 Temple Place - Suite 330, Boston, MA 02111-1307, USA.
- //
- #ifndef BLITZ_INTERFACE_HH
- #define BLITZ_INTERFACE_HH
- #include <blitz/blitz.h>
- #include <blitz/array.h>
- #include <blitz/vector-et.h>
- #include <blitz/vecwhere.h>
- #include <blitz/matrix.h>
- #include <vector>
- BZ_USING_NAMESPACE(blitz)
- template<class real>
- class blitz_interface{
- public :
- typedef real real_type ;
- typedef std::vector<real> stl_vector;
- typedef std::vector<stl_vector > stl_matrix;
- typedef blitz::Array<real, 2> gene_matrix;
- typedef blitz::Array<real, 1> gene_vector;
- // typedef blitz::Matrix<real, blitz::ColumnMajor> gene_matrix;
- // typedef blitz::Vector<real> gene_vector;
- static inline std::string name() { return "blitz"; }
- static void free_matrix(gene_matrix & A, int N){}
- static void free_vector(gene_vector & B){}
- static inline void matrix_from_stl(gene_matrix & A, stl_matrix & A_stl){
- A.resize(A_stl[0].size(),A_stl.size());
- for (int j=0; j<A_stl.size() ; j++){
- for (int i=0; i<A_stl[j].size() ; i++){
- A(i,j)=A_stl[j][i];
- }
- }
- }
- static inline void vector_from_stl(gene_vector & B, stl_vector & B_stl){
- B.resize(B_stl.size());
- for (int i=0; i<B_stl.size() ; i++){
- B(i)=B_stl[i];
- }
- }
- static inline void vector_to_stl(gene_vector & B, stl_vector & B_stl){
- for (int i=0; i<B_stl.size() ; i++){
- B_stl[i]=B(i);
- }
- }
- static inline void matrix_to_stl(gene_matrix & A, stl_matrix & A_stl){
- int N=A_stl.size();
- for (int j=0;j<N;j++){
- A_stl[j].resize(N);
- for (int i=0;i<N;i++)
- A_stl[j][i] = A(i,j);
- }
- }
- static inline void matrix_matrix_product(const gene_matrix & A, const gene_matrix & B, gene_matrix & X, int N)
- {
- firstIndex i;
- secondIndex j;
- thirdIndex k;
- X = sum(A(i,k) * B(k,j), k);
- }
- static inline void ata_product(const gene_matrix & A, gene_matrix & X, int N)
- {
- firstIndex i;
- secondIndex j;
- thirdIndex k;
- X = sum(A(k,i) * A(k,j), k);
- }
- static inline void aat_product(const gene_matrix & A, gene_matrix & X, int N)
- {
- firstIndex i;
- secondIndex j;
- thirdIndex k;
- X = sum(A(i,k) * A(j,k), k);
- }
- static inline void matrix_vector_product(gene_matrix & A, gene_vector & B, gene_vector & X, int N)
- {
- firstIndex i;
- secondIndex j;
- X = sum(A(i,j)*B(j),j);
- }
- static inline void atv_product(gene_matrix & A, gene_vector & B, gene_vector & X, int N)
- {
- firstIndex i;
- secondIndex j;
- X = sum(A(j,i) * B(j),j);
- }
- static inline void axpy(const real coef, const gene_vector & X, gene_vector & Y, int N)
- {
- firstIndex i;
- Y = Y(i) + coef * X(i);
- //Y += coef * X;
- }
- static inline void copy_matrix(const gene_matrix & source, gene_matrix & cible, int N){
- cible = source;
- //cible.template operator=<gene_matrix>(source);
- // for (int i=0;i<N;i++){
- // for (int j=0;j<N;j++){
- // cible(i,j)=source(i,j);
- // }
- // }
- }
- static inline void copy_vector(const gene_vector & source, gene_vector & cible, int N){
- //cible.template operator=<gene_vector>(source);
- cible = source;
- }
- };
- #endif
|