test_relabel.py 14 KB

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  1. import pytest
  2. import networkx as nx
  3. from networkx.generators.classic import empty_graph
  4. from networkx.utils import edges_equal, nodes_equal
  5. class TestRelabel:
  6. def test_convert_node_labels_to_integers(self):
  7. # test that empty graph converts fine for all options
  8. G = empty_graph()
  9. H = nx.convert_node_labels_to_integers(G, 100)
  10. assert list(H.nodes()) == []
  11. assert list(H.edges()) == []
  12. for opt in ["default", "sorted", "increasing degree", "decreasing degree"]:
  13. G = empty_graph()
  14. H = nx.convert_node_labels_to_integers(G, 100, ordering=opt)
  15. assert list(H.nodes()) == []
  16. assert list(H.edges()) == []
  17. G = empty_graph()
  18. G.add_edges_from([("A", "B"), ("A", "C"), ("B", "C"), ("C", "D")])
  19. H = nx.convert_node_labels_to_integers(G)
  20. degH = (d for n, d in H.degree())
  21. degG = (d for n, d in G.degree())
  22. assert sorted(degH) == sorted(degG)
  23. H = nx.convert_node_labels_to_integers(G, 1000)
  24. degH = (d for n, d in H.degree())
  25. degG = (d for n, d in G.degree())
  26. assert sorted(degH) == sorted(degG)
  27. assert nodes_equal(H.nodes(), [1000, 1001, 1002, 1003])
  28. H = nx.convert_node_labels_to_integers(G, ordering="increasing degree")
  29. degH = (d for n, d in H.degree())
  30. degG = (d for n, d in G.degree())
  31. assert sorted(degH) == sorted(degG)
  32. assert H.degree(0) == 1
  33. assert H.degree(1) == 2
  34. assert H.degree(2) == 2
  35. assert H.degree(3) == 3
  36. H = nx.convert_node_labels_to_integers(G, ordering="decreasing degree")
  37. degH = (d for n, d in H.degree())
  38. degG = (d for n, d in G.degree())
  39. assert sorted(degH) == sorted(degG)
  40. assert H.degree(0) == 3
  41. assert H.degree(1) == 2
  42. assert H.degree(2) == 2
  43. assert H.degree(3) == 1
  44. H = nx.convert_node_labels_to_integers(
  45. G, ordering="increasing degree", label_attribute="label"
  46. )
  47. degH = (d for n, d in H.degree())
  48. degG = (d for n, d in G.degree())
  49. assert sorted(degH) == sorted(degG)
  50. assert H.degree(0) == 1
  51. assert H.degree(1) == 2
  52. assert H.degree(2) == 2
  53. assert H.degree(3) == 3
  54. # check mapping
  55. assert H.nodes[3]["label"] == "C"
  56. assert H.nodes[0]["label"] == "D"
  57. assert H.nodes[1]["label"] == "A" or H.nodes[2]["label"] == "A"
  58. assert H.nodes[1]["label"] == "B" or H.nodes[2]["label"] == "B"
  59. def test_convert_to_integers2(self):
  60. G = empty_graph()
  61. G.add_edges_from([("C", "D"), ("A", "B"), ("A", "C"), ("B", "C")])
  62. H = nx.convert_node_labels_to_integers(G, ordering="sorted")
  63. degH = (d for n, d in H.degree())
  64. degG = (d for n, d in G.degree())
  65. assert sorted(degH) == sorted(degG)
  66. H = nx.convert_node_labels_to_integers(
  67. G, ordering="sorted", label_attribute="label"
  68. )
  69. assert H.nodes[0]["label"] == "A"
  70. assert H.nodes[1]["label"] == "B"
  71. assert H.nodes[2]["label"] == "C"
  72. assert H.nodes[3]["label"] == "D"
  73. def test_convert_to_integers_raise(self):
  74. with pytest.raises(nx.NetworkXError):
  75. G = nx.Graph()
  76. H = nx.convert_node_labels_to_integers(G, ordering="increasing age")
  77. def test_relabel_nodes_copy(self):
  78. G = nx.empty_graph()
  79. G.add_edges_from([("A", "B"), ("A", "C"), ("B", "C"), ("C", "D")])
  80. mapping = {"A": "aardvark", "B": "bear", "C": "cat", "D": "dog"}
  81. H = nx.relabel_nodes(G, mapping)
  82. assert nodes_equal(H.nodes(), ["aardvark", "bear", "cat", "dog"])
  83. def test_relabel_nodes_function(self):
  84. G = nx.empty_graph()
  85. G.add_edges_from([("A", "B"), ("A", "C"), ("B", "C"), ("C", "D")])
  86. # function mapping no longer encouraged but works
  87. def mapping(n):
  88. return ord(n)
  89. H = nx.relabel_nodes(G, mapping)
  90. assert nodes_equal(H.nodes(), [65, 66, 67, 68])
  91. def test_relabel_nodes_callable_type(self):
  92. G = nx.path_graph(4)
  93. H = nx.relabel_nodes(G, str)
  94. assert nodes_equal(H.nodes, ["0", "1", "2", "3"])
  95. @pytest.mark.parametrize("non_mc", ("0123", ["0", "1", "2", "3"]))
  96. def test_relabel_nodes_non_mapping_or_callable(self, non_mc):
  97. """If `mapping` is neither a Callable or a Mapping, an exception
  98. should be raised."""
  99. G = nx.path_graph(4)
  100. with pytest.raises(AttributeError):
  101. nx.relabel_nodes(G, non_mc)
  102. def test_relabel_nodes_graph(self):
  103. G = nx.Graph([("A", "B"), ("A", "C"), ("B", "C"), ("C", "D")])
  104. mapping = {"A": "aardvark", "B": "bear", "C": "cat", "D": "dog"}
  105. H = nx.relabel_nodes(G, mapping)
  106. assert nodes_equal(H.nodes(), ["aardvark", "bear", "cat", "dog"])
  107. def test_relabel_nodes_orderedgraph(self):
  108. G = nx.Graph()
  109. G.add_nodes_from([1, 2, 3])
  110. G.add_edges_from([(1, 3), (2, 3)])
  111. mapping = {1: "a", 2: "b", 3: "c"}
  112. H = nx.relabel_nodes(G, mapping)
  113. assert list(H.nodes) == ["a", "b", "c"]
  114. def test_relabel_nodes_digraph(self):
  115. G = nx.DiGraph([("A", "B"), ("A", "C"), ("B", "C"), ("C", "D")])
  116. mapping = {"A": "aardvark", "B": "bear", "C": "cat", "D": "dog"}
  117. H = nx.relabel_nodes(G, mapping, copy=False)
  118. assert nodes_equal(H.nodes(), ["aardvark", "bear", "cat", "dog"])
  119. def test_relabel_nodes_multigraph(self):
  120. G = nx.MultiGraph([("a", "b"), ("a", "b")])
  121. mapping = {"a": "aardvark", "b": "bear"}
  122. G = nx.relabel_nodes(G, mapping, copy=False)
  123. assert nodes_equal(G.nodes(), ["aardvark", "bear"])
  124. assert edges_equal(G.edges(), [("aardvark", "bear"), ("aardvark", "bear")])
  125. def test_relabel_nodes_multidigraph(self):
  126. G = nx.MultiDiGraph([("a", "b"), ("a", "b")])
  127. mapping = {"a": "aardvark", "b": "bear"}
  128. G = nx.relabel_nodes(G, mapping, copy=False)
  129. assert nodes_equal(G.nodes(), ["aardvark", "bear"])
  130. assert edges_equal(G.edges(), [("aardvark", "bear"), ("aardvark", "bear")])
  131. def test_relabel_isolated_nodes_to_same(self):
  132. G = nx.Graph()
  133. G.add_nodes_from(range(4))
  134. mapping = {1: 1}
  135. H = nx.relabel_nodes(G, mapping, copy=False)
  136. assert nodes_equal(H.nodes(), list(range(4)))
  137. def test_relabel_nodes_missing(self):
  138. G = nx.Graph([("A", "B"), ("A", "C"), ("B", "C"), ("C", "D")])
  139. mapping = {0: "aardvark"}
  140. # copy=True
  141. H = nx.relabel_nodes(G, mapping, copy=True)
  142. assert nodes_equal(H.nodes, G.nodes)
  143. # copy=False
  144. GG = G.copy()
  145. nx.relabel_nodes(G, mapping, copy=False)
  146. assert nodes_equal(G.nodes, GG.nodes)
  147. def test_relabel_copy_name(self):
  148. G = nx.Graph()
  149. H = nx.relabel_nodes(G, {}, copy=True)
  150. assert H.graph == G.graph
  151. H = nx.relabel_nodes(G, {}, copy=False)
  152. assert H.graph == G.graph
  153. G.name = "first"
  154. H = nx.relabel_nodes(G, {}, copy=True)
  155. assert H.graph == G.graph
  156. H = nx.relabel_nodes(G, {}, copy=False)
  157. assert H.graph == G.graph
  158. def test_relabel_toposort(self):
  159. K5 = nx.complete_graph(4)
  160. G = nx.complete_graph(4)
  161. G = nx.relabel_nodes(G, {i: i + 1 for i in range(4)}, copy=False)
  162. assert nx.is_isomorphic(K5, G)
  163. G = nx.complete_graph(4)
  164. G = nx.relabel_nodes(G, {i: i - 1 for i in range(4)}, copy=False)
  165. assert nx.is_isomorphic(K5, G)
  166. def test_relabel_selfloop(self):
  167. G = nx.DiGraph([(1, 1), (1, 2), (2, 3)])
  168. G = nx.relabel_nodes(G, {1: "One", 2: "Two", 3: "Three"}, copy=False)
  169. assert nodes_equal(G.nodes(), ["One", "Three", "Two"])
  170. G = nx.MultiDiGraph([(1, 1), (1, 2), (2, 3)])
  171. G = nx.relabel_nodes(G, {1: "One", 2: "Two", 3: "Three"}, copy=False)
  172. assert nodes_equal(G.nodes(), ["One", "Three", "Two"])
  173. G = nx.MultiDiGraph([(1, 1)])
  174. G = nx.relabel_nodes(G, {1: 0}, copy=False)
  175. assert nodes_equal(G.nodes(), [0])
  176. def test_relabel_multidigraph_inout_merge_nodes(self):
  177. for MG in (nx.MultiGraph, nx.MultiDiGraph):
  178. for cc in (True, False):
  179. G = MG([(0, 4), (1, 4), (4, 2), (4, 3)])
  180. G[0][4][0]["value"] = "a"
  181. G[1][4][0]["value"] = "b"
  182. G[4][2][0]["value"] = "c"
  183. G[4][3][0]["value"] = "d"
  184. G.add_edge(0, 4, key="x", value="e")
  185. G.add_edge(4, 3, key="x", value="f")
  186. mapping = {0: 9, 1: 9, 2: 9, 3: 9}
  187. H = nx.relabel_nodes(G, mapping, copy=cc)
  188. # No ordering on keys enforced
  189. assert {"value": "a"} in H[9][4].values()
  190. assert {"value": "b"} in H[9][4].values()
  191. assert {"value": "c"} in H[4][9].values()
  192. assert len(H[4][9]) == 3 if G.is_directed() else 6
  193. assert {"value": "d"} in H[4][9].values()
  194. assert {"value": "e"} in H[9][4].values()
  195. assert {"value": "f"} in H[4][9].values()
  196. assert len(H[9][4]) == 3 if G.is_directed() else 6
  197. def test_relabel_multigraph_merge_inplace(self):
  198. G = nx.MultiGraph([(0, 1), (0, 2), (0, 3), (0, 1), (0, 2), (0, 3)])
  199. G[0][1][0]["value"] = "a"
  200. G[0][2][0]["value"] = "b"
  201. G[0][3][0]["value"] = "c"
  202. mapping = {1: 4, 2: 4, 3: 4}
  203. nx.relabel_nodes(G, mapping, copy=False)
  204. # No ordering on keys enforced
  205. assert {"value": "a"} in G[0][4].values()
  206. assert {"value": "b"} in G[0][4].values()
  207. assert {"value": "c"} in G[0][4].values()
  208. def test_relabel_multidigraph_merge_inplace(self):
  209. G = nx.MultiDiGraph([(0, 1), (0, 2), (0, 3)])
  210. G[0][1][0]["value"] = "a"
  211. G[0][2][0]["value"] = "b"
  212. G[0][3][0]["value"] = "c"
  213. mapping = {1: 4, 2: 4, 3: 4}
  214. nx.relabel_nodes(G, mapping, copy=False)
  215. # No ordering on keys enforced
  216. assert {"value": "a"} in G[0][4].values()
  217. assert {"value": "b"} in G[0][4].values()
  218. assert {"value": "c"} in G[0][4].values()
  219. def test_relabel_multidigraph_inout_copy(self):
  220. G = nx.MultiDiGraph([(0, 4), (1, 4), (4, 2), (4, 3)])
  221. G[0][4][0]["value"] = "a"
  222. G[1][4][0]["value"] = "b"
  223. G[4][2][0]["value"] = "c"
  224. G[4][3][0]["value"] = "d"
  225. G.add_edge(0, 4, key="x", value="e")
  226. G.add_edge(4, 3, key="x", value="f")
  227. mapping = {0: 9, 1: 9, 2: 9, 3: 9}
  228. H = nx.relabel_nodes(G, mapping, copy=True)
  229. # No ordering on keys enforced
  230. assert {"value": "a"} in H[9][4].values()
  231. assert {"value": "b"} in H[9][4].values()
  232. assert {"value": "c"} in H[4][9].values()
  233. assert len(H[4][9]) == 3
  234. assert {"value": "d"} in H[4][9].values()
  235. assert {"value": "e"} in H[9][4].values()
  236. assert {"value": "f"} in H[4][9].values()
  237. assert len(H[9][4]) == 3
  238. def test_relabel_multigraph_merge_copy(self):
  239. G = nx.MultiGraph([(0, 1), (0, 2), (0, 3)])
  240. G[0][1][0]["value"] = "a"
  241. G[0][2][0]["value"] = "b"
  242. G[0][3][0]["value"] = "c"
  243. mapping = {1: 4, 2: 4, 3: 4}
  244. H = nx.relabel_nodes(G, mapping, copy=True)
  245. assert {"value": "a"} in H[0][4].values()
  246. assert {"value": "b"} in H[0][4].values()
  247. assert {"value": "c"} in H[0][4].values()
  248. def test_relabel_multidigraph_merge_copy(self):
  249. G = nx.MultiDiGraph([(0, 1), (0, 2), (0, 3)])
  250. G[0][1][0]["value"] = "a"
  251. G[0][2][0]["value"] = "b"
  252. G[0][3][0]["value"] = "c"
  253. mapping = {1: 4, 2: 4, 3: 4}
  254. H = nx.relabel_nodes(G, mapping, copy=True)
  255. assert {"value": "a"} in H[0][4].values()
  256. assert {"value": "b"} in H[0][4].values()
  257. assert {"value": "c"} in H[0][4].values()
  258. def test_relabel_multigraph_nonnumeric_key(self):
  259. for MG in (nx.MultiGraph, nx.MultiDiGraph):
  260. for cc in (True, False):
  261. G = nx.MultiGraph()
  262. G.add_edge(0, 1, key="I", value="a")
  263. G.add_edge(0, 2, key="II", value="b")
  264. G.add_edge(0, 3, key="II", value="c")
  265. mapping = {1: 4, 2: 4, 3: 4}
  266. nx.relabel_nodes(G, mapping, copy=False)
  267. assert {"value": "a"} in G[0][4].values()
  268. assert {"value": "b"} in G[0][4].values()
  269. assert {"value": "c"} in G[0][4].values()
  270. assert 0 in G[0][4]
  271. assert "I" in G[0][4]
  272. assert "II" in G[0][4]
  273. def test_relabel_circular(self):
  274. G = nx.path_graph(3)
  275. mapping = {0: 1, 1: 0}
  276. H = nx.relabel_nodes(G, mapping, copy=True)
  277. with pytest.raises(nx.NetworkXUnfeasible):
  278. H = nx.relabel_nodes(G, mapping, copy=False)
  279. def test_relabel_preserve_node_order_full_mapping_with_copy_true(self):
  280. G = nx.path_graph(3)
  281. original_order = list(G.nodes())
  282. mapping = {2: "a", 1: "b", 0: "c"} # dictionary keys out of order on purpose
  283. H = nx.relabel_nodes(G, mapping, copy=True)
  284. new_order = list(H.nodes())
  285. assert [mapping.get(i, i) for i in original_order] == new_order
  286. def test_relabel_preserve_node_order_full_mapping_with_copy_false(self):
  287. G = nx.path_graph(3)
  288. original_order = list(G)
  289. mapping = {2: "a", 1: "b", 0: "c"} # dictionary keys out of order on purpose
  290. H = nx.relabel_nodes(G, mapping, copy=False)
  291. new_order = list(H)
  292. assert [mapping.get(i, i) for i in original_order] == new_order
  293. def test_relabel_preserve_node_order_partial_mapping_with_copy_true(self):
  294. G = nx.path_graph(3)
  295. original_order = list(G)
  296. mapping = {1: "a", 0: "b"} # partial mapping and keys out of order on purpose
  297. H = nx.relabel_nodes(G, mapping, copy=True)
  298. new_order = list(H)
  299. assert [mapping.get(i, i) for i in original_order] == new_order
  300. def test_relabel_preserve_node_order_partial_mapping_with_copy_false(self):
  301. G = nx.path_graph(3)
  302. original_order = list(G)
  303. mapping = {1: "a", 0: "b"} # partial mapping and keys out of order on purpose
  304. H = nx.relabel_nodes(G, mapping, copy=False)
  305. new_order = list(H)
  306. assert [mapping.get(i, i) for i in original_order] != new_order