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- import pytest
- import textwrap
- from numpy.testing import assert_array_equal, assert_equal, assert_raises
- import numpy as np
- from numpy.f2py.tests import util
- class TestCharacterString(util.F2PyTest):
- # options = ['--debug-capi', '--build-dir', '/tmp/test-build-f2py']
- suffix = '.f90'
- fprefix = 'test_character_string'
- length_list = ['1', '3', 'star']
- code = ''
- for length in length_list:
- fsuffix = length
- clength = dict(star='(*)').get(length, length)
- code += textwrap.dedent(f"""
- subroutine {fprefix}_input_{fsuffix}(c, o, n)
- character*{clength}, intent(in) :: c
- integer n
- !f2py integer, depend(c), intent(hide) :: n = slen(c)
- integer*1, dimension(n) :: o
- !f2py intent(out) o
- o = transfer(c, o)
- end subroutine {fprefix}_input_{fsuffix}
- subroutine {fprefix}_output_{fsuffix}(c, o, n)
- character*{clength}, intent(out) :: c
- integer n
- integer*1, dimension(n), intent(in) :: o
- !f2py integer, depend(o), intent(hide) :: n = len(o)
- c = transfer(o, c)
- end subroutine {fprefix}_output_{fsuffix}
- subroutine {fprefix}_array_input_{fsuffix}(c, o, m, n)
- integer m, i, n
- character*{clength}, intent(in), dimension(m) :: c
- !f2py integer, depend(c), intent(hide) :: m = len(c)
- !f2py integer, depend(c), intent(hide) :: n = f2py_itemsize(c)
- integer*1, dimension(m, n), intent(out) :: o
- do i=1,m
- o(i, :) = transfer(c(i), o(i, :))
- end do
- end subroutine {fprefix}_array_input_{fsuffix}
- subroutine {fprefix}_array_output_{fsuffix}(c, o, m, n)
- character*{clength}, intent(out), dimension(m) :: c
- integer n
- integer*1, dimension(m, n), intent(in) :: o
- !f2py character(f2py_len=n) :: c
- !f2py integer, depend(o), intent(hide) :: m = len(o)
- !f2py integer, depend(o), intent(hide) :: n = shape(o, 1)
- do i=1,m
- c(i) = transfer(o(i, :), c(i))
- end do
- end subroutine {fprefix}_array_output_{fsuffix}
- subroutine {fprefix}_2d_array_input_{fsuffix}(c, o, m1, m2, n)
- integer m1, m2, i, j, n
- character*{clength}, intent(in), dimension(m1, m2) :: c
- !f2py integer, depend(c), intent(hide) :: m1 = len(c)
- !f2py integer, depend(c), intent(hide) :: m2 = shape(c, 1)
- !f2py integer, depend(c), intent(hide) :: n = f2py_itemsize(c)
- integer*1, dimension(m1, m2, n), intent(out) :: o
- do i=1,m1
- do j=1,m2
- o(i, j, :) = transfer(c(i, j), o(i, j, :))
- end do
- end do
- end subroutine {fprefix}_2d_array_input_{fsuffix}
- """)
- @pytest.mark.parametrize("length", length_list)
- def test_input(self, length):
- fsuffix = {'(*)': 'star'}.get(length, length)
- f = getattr(self.module, self.fprefix + '_input_' + fsuffix)
- a = {'1': 'a', '3': 'abc', 'star': 'abcde' * 3}[length]
- assert_array_equal(f(a), np.array(list(map(ord, a)), dtype='u1'))
- @pytest.mark.parametrize("length", length_list[:-1])
- def test_output(self, length):
- fsuffix = length
- f = getattr(self.module, self.fprefix + '_output_' + fsuffix)
- a = {'1': 'a', '3': 'abc'}[length]
- assert_array_equal(f(np.array(list(map(ord, a)), dtype='u1')),
- a.encode())
- @pytest.mark.parametrize("length", length_list)
- def test_array_input(self, length):
- fsuffix = length
- f = getattr(self.module, self.fprefix + '_array_input_' + fsuffix)
- a = np.array([{'1': 'a', '3': 'abc', 'star': 'abcde' * 3}[length],
- {'1': 'A', '3': 'ABC', 'star': 'ABCDE' * 3}[length],
- ], dtype='S')
- expected = np.array([[c for c in s] for s in a], dtype='u1')
- assert_array_equal(f(a), expected)
- @pytest.mark.parametrize("length", length_list)
- def test_array_output(self, length):
- fsuffix = length
- f = getattr(self.module, self.fprefix + '_array_output_' + fsuffix)
- expected = np.array(
- [{'1': 'a', '3': 'abc', 'star': 'abcde' * 3}[length],
- {'1': 'A', '3': 'ABC', 'star': 'ABCDE' * 3}[length]], dtype='S')
- a = np.array([[c for c in s] for s in expected], dtype='u1')
- assert_array_equal(f(a), expected)
- @pytest.mark.parametrize("length", length_list)
- def test_2d_array_input(self, length):
- fsuffix = length
- f = getattr(self.module, self.fprefix + '_2d_array_input_' + fsuffix)
- a = np.array([[{'1': 'a', '3': 'abc', 'star': 'abcde' * 3}[length],
- {'1': 'A', '3': 'ABC', 'star': 'ABCDE' * 3}[length]],
- [{'1': 'f', '3': 'fgh', 'star': 'fghij' * 3}[length],
- {'1': 'F', '3': 'FGH', 'star': 'FGHIJ' * 3}[length]]],
- dtype='S')
- expected = np.array([[[c for c in item] for item in row] for row in a],
- dtype='u1', order='F')
- assert_array_equal(f(a), expected)
- class TestCharacter(util.F2PyTest):
- # options = ['--debug-capi', '--build-dir', '/tmp/test-build-f2py']
- suffix = '.f90'
- fprefix = 'test_character'
- code = textwrap.dedent(f"""
- subroutine {fprefix}_input(c, o)
- character, intent(in) :: c
- integer*1 o
- !f2py intent(out) o
- o = transfer(c, o)
- end subroutine {fprefix}_input
- subroutine {fprefix}_output(c, o)
- character :: c
- integer*1, intent(in) :: o
- !f2py intent(out) c
- c = transfer(o, c)
- end subroutine {fprefix}_output
- subroutine {fprefix}_input_output(c, o)
- character, intent(in) :: c
- character o
- !f2py intent(out) o
- o = c
- end subroutine {fprefix}_input_output
- subroutine {fprefix}_inout(c, n)
- character :: c, n
- !f2py intent(in) n
- !f2py intent(inout) c
- c = n
- end subroutine {fprefix}_inout
- function {fprefix}_return(o) result (c)
- character :: c
- character, intent(in) :: o
- c = transfer(o, c)
- end function {fprefix}_return
- subroutine {fprefix}_array_input(c, o)
- character, intent(in) :: c(3)
- integer*1 o(3)
- !f2py intent(out) o
- integer i
- do i=1,3
- o(i) = transfer(c(i), o(i))
- end do
- end subroutine {fprefix}_array_input
- subroutine {fprefix}_2d_array_input(c, o)
- character, intent(in) :: c(2, 3)
- integer*1 o(2, 3)
- !f2py intent(out) o
- integer i, j
- do i=1,2
- do j=1,3
- o(i, j) = transfer(c(i, j), o(i, j))
- end do
- end do
- end subroutine {fprefix}_2d_array_input
- subroutine {fprefix}_array_output(c, o)
- character :: c(3)
- integer*1, intent(in) :: o(3)
- !f2py intent(out) c
- do i=1,3
- c(i) = transfer(o(i), c(i))
- end do
- end subroutine {fprefix}_array_output
- subroutine {fprefix}_array_inout(c, n)
- character :: c(3), n(3)
- !f2py intent(in) n(3)
- !f2py intent(inout) c(3)
- do i=1,3
- c(i) = n(i)
- end do
- end subroutine {fprefix}_array_inout
- subroutine {fprefix}_2d_array_inout(c, n)
- character :: c(2, 3), n(2, 3)
- !f2py intent(in) n(2, 3)
- !f2py intent(inout) c(2. 3)
- integer i, j
- do i=1,2
- do j=1,3
- c(i, j) = n(i, j)
- end do
- end do
- end subroutine {fprefix}_2d_array_inout
- function {fprefix}_array_return(o) result (c)
- character, dimension(3) :: c
- character, intent(in) :: o(3)
- do i=1,3
- c(i) = o(i)
- end do
- end function {fprefix}_array_return
- function {fprefix}_optional(o) result (c)
- character, intent(in) :: o
- !f2py character o = "a"
- character :: c
- c = o
- end function {fprefix}_optional
- """)
- @pytest.mark.parametrize("dtype", ['c', 'S1'])
- def test_input(self, dtype):
- f = getattr(self.module, self.fprefix + '_input')
- assert_equal(f(np.array('a', dtype=dtype)), ord('a'))
- assert_equal(f(np.array(b'a', dtype=dtype)), ord('a'))
- assert_equal(f(np.array(['a'], dtype=dtype)), ord('a'))
- assert_equal(f(np.array('abc', dtype=dtype)), ord('a'))
- assert_equal(f(np.array([['a']], dtype=dtype)), ord('a'))
- def test_input_varia(self):
- f = getattr(self.module, self.fprefix + '_input')
- assert_equal(f('a'), ord('a'))
- assert_equal(f(b'a'), ord(b'a'))
- assert_equal(f(''), 0)
- assert_equal(f(b''), 0)
- assert_equal(f(b'\0'), 0)
- assert_equal(f('ab'), ord('a'))
- assert_equal(f(b'ab'), ord('a'))
- assert_equal(f(['a']), ord('a'))
- assert_equal(f(np.array(b'a')), ord('a'))
- assert_equal(f(np.array([b'a'])), ord('a'))
- a = np.array('a')
- assert_equal(f(a), ord('a'))
- a = np.array(['a'])
- assert_equal(f(a), ord('a'))
- try:
- f([])
- except IndexError as msg:
- if not str(msg).endswith(' got 0-list'):
- raise
- else:
- raise SystemError(f'{f.__name__} should have failed on empty list')
- try:
- f(97)
- except TypeError as msg:
- if not str(msg).endswith(' got int instance'):
- raise
- else:
- raise SystemError(f'{f.__name__} should have failed on int value')
- @pytest.mark.parametrize("dtype", ['c', 'S1', 'U1'])
- def test_array_input(self, dtype):
- f = getattr(self.module, self.fprefix + '_array_input')
- assert_array_equal(f(np.array(['a', 'b', 'c'], dtype=dtype)),
- np.array(list(map(ord, 'abc')), dtype='i1'))
- assert_array_equal(f(np.array([b'a', b'b', b'c'], dtype=dtype)),
- np.array(list(map(ord, 'abc')), dtype='i1'))
- def test_array_input_varia(self):
- f = getattr(self.module, self.fprefix + '_array_input')
- assert_array_equal(f(['a', 'b', 'c']),
- np.array(list(map(ord, 'abc')), dtype='i1'))
- assert_array_equal(f([b'a', b'b', b'c']),
- np.array(list(map(ord, 'abc')), dtype='i1'))
- try:
- f(['a', 'b', 'c', 'd'])
- except ValueError as msg:
- if not str(msg).endswith(
- 'th dimension must be fixed to 3 but got 4'):
- raise
- else:
- raise SystemError(
- f'{f.__name__} should have failed on wrong input')
- @pytest.mark.parametrize("dtype", ['c', 'S1', 'U1'])
- def test_2d_array_input(self, dtype):
- f = getattr(self.module, self.fprefix + '_2d_array_input')
- a = np.array([['a', 'b', 'c'],
- ['d', 'e', 'f']], dtype=dtype, order='F')
- expected = a.view(np.uint32 if dtype == 'U1' else np.uint8)
- assert_array_equal(f(a), expected)
- def test_output(self):
- f = getattr(self.module, self.fprefix + '_output')
- assert_equal(f(ord(b'a')), b'a')
- assert_equal(f(0), b'\0')
- def test_array_output(self):
- f = getattr(self.module, self.fprefix + '_array_output')
- assert_array_equal(f(list(map(ord, 'abc'))),
- np.array(list('abc'), dtype='S1'))
- def test_input_output(self):
- f = getattr(self.module, self.fprefix + '_input_output')
- assert_equal(f(b'a'), b'a')
- assert_equal(f('a'), b'a')
- assert_equal(f(''), b'\0')
- @pytest.mark.parametrize("dtype", ['c', 'S1'])
- def test_inout(self, dtype):
- f = getattr(self.module, self.fprefix + '_inout')
- a = np.array(list('abc'), dtype=dtype)
- f(a, 'A')
- assert_array_equal(a, np.array(list('Abc'), dtype=a.dtype))
- f(a[1:], 'B')
- assert_array_equal(a, np.array(list('ABc'), dtype=a.dtype))
- a = np.array(['abc'], dtype=dtype)
- f(a, 'A')
- assert_array_equal(a, np.array(['Abc'], dtype=a.dtype))
- def test_inout_varia(self):
- f = getattr(self.module, self.fprefix + '_inout')
- a = np.array('abc', dtype='S3')
- f(a, 'A')
- assert_array_equal(a, np.array('Abc', dtype=a.dtype))
- a = np.array(['abc'], dtype='S3')
- f(a, 'A')
- assert_array_equal(a, np.array(['Abc'], dtype=a.dtype))
- try:
- f('abc', 'A')
- except ValueError as msg:
- if not str(msg).endswith(' got 3-str'):
- raise
- else:
- raise SystemError(f'{f.__name__} should have failed on str value')
- @pytest.mark.parametrize("dtype", ['c', 'S1'])
- def test_array_inout(self, dtype):
- f = getattr(self.module, self.fprefix + '_array_inout')
- n = np.array(['A', 'B', 'C'], dtype=dtype, order='F')
- a = np.array(['a', 'b', 'c'], dtype=dtype, order='F')
- f(a, n)
- assert_array_equal(a, n)
- a = np.array(['a', 'b', 'c', 'd'], dtype=dtype)
- f(a[1:], n)
- assert_array_equal(a, np.array(['a', 'A', 'B', 'C'], dtype=dtype))
- a = np.array([['a', 'b', 'c']], dtype=dtype, order='F')
- f(a, n)
- assert_array_equal(a, np.array([['A', 'B', 'C']], dtype=dtype))
- a = np.array(['a', 'b', 'c', 'd'], dtype=dtype, order='F')
- try:
- f(a, n)
- except ValueError as msg:
- if not str(msg).endswith(
- 'th dimension must be fixed to 3 but got 4'):
- raise
- else:
- raise SystemError(
- f'{f.__name__} should have failed on wrong input')
- @pytest.mark.parametrize("dtype", ['c', 'S1'])
- def test_2d_array_inout(self, dtype):
- f = getattr(self.module, self.fprefix + '_2d_array_inout')
- n = np.array([['A', 'B', 'C'],
- ['D', 'E', 'F']],
- dtype=dtype, order='F')
- a = np.array([['a', 'b', 'c'],
- ['d', 'e', 'f']],
- dtype=dtype, order='F')
- f(a, n)
- assert_array_equal(a, n)
- def test_return(self):
- f = getattr(self.module, self.fprefix + '_return')
- assert_equal(f('a'), b'a')
- @pytest.mark.skip('fortran function returning array segfaults')
- def test_array_return(self):
- f = getattr(self.module, self.fprefix + '_array_return')
- a = np.array(list('abc'), dtype='S1')
- assert_array_equal(f(a), a)
- def test_optional(self):
- f = getattr(self.module, self.fprefix + '_optional')
- assert_equal(f(), b"a")
- assert_equal(f(b'B'), b"B")
- class TestMiscCharacter(util.F2PyTest):
- # options = ['--debug-capi', '--build-dir', '/tmp/test-build-f2py']
- suffix = '.f90'
- fprefix = 'test_misc_character'
- code = textwrap.dedent(f"""
- subroutine {fprefix}_gh18684(x, y, m)
- character(len=5), dimension(m), intent(in) :: x
- character*5, dimension(m), intent(out) :: y
- integer i, m
- !f2py integer, intent(hide), depend(x) :: m = f2py_len(x)
- do i=1,m
- y(i) = x(i)
- end do
- end subroutine {fprefix}_gh18684
- subroutine {fprefix}_gh6308(x, i)
- integer i
- !f2py check(i>=0 && i<12) i
- character*5 name, x
- common name(12)
- name(i + 1) = x
- end subroutine {fprefix}_gh6308
- subroutine {fprefix}_gh4519(x)
- character(len=*), intent(in) :: x(:)
- !f2py intent(out) x
- integer :: i
- do i=1, size(x)
- print*, "x(",i,")=", x(i)
- end do
- end subroutine {fprefix}_gh4519
- pure function {fprefix}_gh3425(x) result (y)
- character(len=*), intent(in) :: x
- character(len=len(x)) :: y
- integer :: i
- do i = 1, len(x)
- j = iachar(x(i:i))
- if (j>=iachar("a") .and. j<=iachar("z") ) then
- y(i:i) = achar(j-32)
- else
- y(i:i) = x(i:i)
- endif
- end do
- end function {fprefix}_gh3425
- subroutine {fprefix}_character_bc_new(x, y, z)
- character, intent(in) :: x
- character, intent(out) :: y
- !f2py character, depend(x) :: y = x
- !f2py character, dimension((x=='a'?1:2)), depend(x), intent(out) :: z
- character, dimension(*) :: z
- !f2py character, optional, check(x == 'a' || x == 'b') :: x = 'a'
- !f2py callstatement (*f2py_func)(&x, &y, z)
- !f2py callprotoargument character*, character*, character*
- if (y.eq.x) then
- y = x
- else
- y = 'e'
- endif
- z(1) = 'c'
- end subroutine {fprefix}_character_bc_new
- subroutine {fprefix}_character_bc_old(x, y, z)
- character, intent(in) :: x
- character, intent(out) :: y
- !f2py character, depend(x) :: y = x[0]
- !f2py character, dimension((*x=='a'?1:2)), depend(x), intent(out) :: z
- character, dimension(*) :: z
- !f2py character, optional, check(*x == 'a' || x[0] == 'b') :: x = 'a'
- !f2py callstatement (*f2py_func)(x, y, z)
- !f2py callprotoargument char*, char*, char*
- if (y.eq.x) then
- y = x
- else
- y = 'e'
- endif
- z(1) = 'c'
- end subroutine {fprefix}_character_bc_old
- """)
- def test_gh18684(self):
- # Test character(len=5) and character*5 usages
- f = getattr(self.module, self.fprefix + '_gh18684')
- x = np.array(["abcde", "fghij"], dtype='S5')
- y = f(x)
- assert_array_equal(x, y)
- def test_gh6308(self):
- # Test character string array in a common block
- f = getattr(self.module, self.fprefix + '_gh6308')
- assert_equal(self.module._BLNK_.name.dtype, np.dtype('S5'))
- assert_equal(len(self.module._BLNK_.name), 12)
- f("abcde", 0)
- assert_equal(self.module._BLNK_.name[0], b"abcde")
- f("12345", 5)
- assert_equal(self.module._BLNK_.name[5], b"12345")
- def test_gh4519(self):
- # Test array of assumed length strings
- f = getattr(self.module, self.fprefix + '_gh4519')
- for x, expected in [
- ('a', dict(shape=(), dtype=np.dtype('S1'))),
- ('text', dict(shape=(), dtype=np.dtype('S4'))),
- (np.array(['1', '2', '3'], dtype='S1'),
- dict(shape=(3,), dtype=np.dtype('S1'))),
- (['1', '2', '34'],
- dict(shape=(3,), dtype=np.dtype('S2'))),
- (['', ''], dict(shape=(2,), dtype=np.dtype('S1')))]:
- r = f(x)
- for k, v in expected.items():
- assert_equal(getattr(r, k), v)
- def test_gh3425(self):
- # Test returning a copy of assumed length string
- f = getattr(self.module, self.fprefix + '_gh3425')
- # f is equivalent to bytes.upper
- assert_equal(f('abC'), b'ABC')
- assert_equal(f(''), b'')
- assert_equal(f('abC12d'), b'ABC12D')
- @pytest.mark.parametrize("state", ['new', 'old'])
- def test_character_bc(self, state):
- f = getattr(self.module, self.fprefix + '_character_bc_' + state)
- c, a = f()
- assert_equal(c, b'a')
- assert_equal(len(a), 1)
- c, a = f(b'b')
- assert_equal(c, b'b')
- assert_equal(len(a), 2)
- assert_raises(Exception, lambda: f(b'c'))
- class TestStringScalarArr(util.F2PyTest):
- sources = [util.getpath("tests", "src", "string", "scalar_string.f90")]
- @pytest.mark.slow
- def test_char(self):
- for out in (self.module.string_test.string,
- self.module.string_test.string77):
- expected = ()
- assert out.shape == expected
- expected = '|S8'
- assert out.dtype == expected
- @pytest.mark.slow
- def test_char_arr(self):
- for out in (self.module.string_test.strarr,
- self.module.string_test.strarr77):
- expected = (5,7)
- assert out.shape == expected
- expected = '|S12'
- assert out.dtype == expected
|