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- """Unit tests for PyGraphviz interface."""
- import os
- import tempfile
- import pytest
- pygraphviz = pytest.importorskip("pygraphviz")
- import networkx as nx
- from networkx.utils import edges_equal, graphs_equal, nodes_equal
- class TestAGraph:
- def build_graph(self, G):
- edges = [("A", "B"), ("A", "C"), ("A", "C"), ("B", "C"), ("A", "D")]
- G.add_edges_from(edges)
- G.add_node("E")
- G.graph["metal"] = "bronze"
- return G
- def assert_equal(self, G1, G2):
- assert nodes_equal(G1.nodes(), G2.nodes())
- assert edges_equal(G1.edges(), G2.edges())
- assert G1.graph["metal"] == G2.graph["metal"]
- def agraph_checks(self, G):
- G = self.build_graph(G)
- A = nx.nx_agraph.to_agraph(G)
- H = nx.nx_agraph.from_agraph(A)
- self.assert_equal(G, H)
- fd, fname = tempfile.mkstemp()
- nx.drawing.nx_agraph.write_dot(H, fname)
- Hin = nx.nx_agraph.read_dot(fname)
- self.assert_equal(H, Hin)
- os.close(fd)
- os.unlink(fname)
- (fd, fname) = tempfile.mkstemp()
- with open(fname, "w") as fh:
- nx.drawing.nx_agraph.write_dot(H, fh)
- with open(fname) as fh:
- Hin = nx.nx_agraph.read_dot(fh)
- os.close(fd)
- os.unlink(fname)
- self.assert_equal(H, Hin)
- def test_from_agraph_name(self):
- G = nx.Graph(name="test")
- A = nx.nx_agraph.to_agraph(G)
- H = nx.nx_agraph.from_agraph(A)
- assert G.name == "test"
- @pytest.mark.parametrize(
- "graph_class", (nx.Graph, nx.DiGraph, nx.MultiGraph, nx.MultiDiGraph)
- )
- def test_from_agraph_create_using(self, graph_class):
- G = nx.path_graph(3)
- A = nx.nx_agraph.to_agraph(G)
- H = nx.nx_agraph.from_agraph(A, create_using=graph_class)
- assert isinstance(H, graph_class)
- def test_from_agraph_named_edges(self):
- # Create an AGraph from an existing (non-multi) Graph
- G = nx.Graph()
- G.add_nodes_from([0, 1])
- A = nx.nx_agraph.to_agraph(G)
- # Add edge (+ name, given by key) to the AGraph
- A.add_edge(0, 1, key="foo")
- # Verify a.name roundtrips out to 'key' in from_agraph
- H = nx.nx_agraph.from_agraph(A)
- assert isinstance(H, nx.Graph)
- assert ("0", "1", {"key": "foo"}) in H.edges(data=True)
- def test_undirected(self):
- self.agraph_checks(nx.Graph())
- def test_directed(self):
- self.agraph_checks(nx.DiGraph())
- def test_multi_undirected(self):
- self.agraph_checks(nx.MultiGraph())
- def test_multi_directed(self):
- self.agraph_checks(nx.MultiDiGraph())
- def test_to_agraph_with_nodedata(self):
- G = nx.Graph()
- G.add_node(1, color="red")
- A = nx.nx_agraph.to_agraph(G)
- assert dict(A.nodes()[0].attr) == {"color": "red"}
- @pytest.mark.parametrize("graph_class", (nx.Graph, nx.MultiGraph))
- def test_to_agraph_with_edgedata(self, graph_class):
- G = graph_class()
- G.add_nodes_from([0, 1])
- G.add_edge(0, 1, color="yellow")
- A = nx.nx_agraph.to_agraph(G)
- assert dict(A.edges()[0].attr) == {"color": "yellow"}
- def test_view_pygraphviz_path(self, tmp_path):
- G = nx.complete_graph(3)
- input_path = str(tmp_path / "graph.png")
- out_path, A = nx.nx_agraph.view_pygraphviz(G, path=input_path, show=False)
- assert out_path == input_path
- # Ensure file is not empty
- with open(input_path, "rb") as fh:
- data = fh.read()
- assert len(data) > 0
- def test_view_pygraphviz_file_suffix(self, tmp_path):
- G = nx.complete_graph(3)
- path, A = nx.nx_agraph.view_pygraphviz(G, suffix=1, show=False)
- assert path[-6:] == "_1.png"
- def test_view_pygraphviz(self):
- G = nx.Graph() # "An empty graph cannot be drawn."
- pytest.raises(nx.NetworkXException, nx.nx_agraph.view_pygraphviz, G)
- G = nx.barbell_graph(4, 6)
- nx.nx_agraph.view_pygraphviz(G, show=False)
- def test_view_pygraphviz_edgelabel(self):
- G = nx.Graph()
- G.add_edge(1, 2, weight=7)
- G.add_edge(2, 3, weight=8)
- path, A = nx.nx_agraph.view_pygraphviz(G, edgelabel="weight", show=False)
- for edge in A.edges():
- assert edge.attr["weight"] in ("7", "8")
- def test_view_pygraphviz_callable_edgelabel(self):
- G = nx.complete_graph(3)
- def foo_label(data):
- return "foo"
- path, A = nx.nx_agraph.view_pygraphviz(G, edgelabel=foo_label, show=False)
- for edge in A.edges():
- assert edge.attr["label"] == "foo"
- def test_view_pygraphviz_multigraph_edgelabels(self):
- G = nx.MultiGraph()
- G.add_edge(0, 1, key=0, name="left_fork")
- G.add_edge(0, 1, key=1, name="right_fork")
- path, A = nx.nx_agraph.view_pygraphviz(G, edgelabel="name", show=False)
- edges = A.edges()
- assert len(edges) == 2
- for edge in edges:
- assert edge.attr["label"].strip() in ("left_fork", "right_fork")
- def test_graph_with_reserved_keywords(self):
- # test attribute/keyword clash case for #1582
- # node: n
- # edges: u,v
- G = nx.Graph()
- G = self.build_graph(G)
- G.nodes["E"]["n"] = "keyword"
- G.edges[("A", "B")]["u"] = "keyword"
- G.edges[("A", "B")]["v"] = "keyword"
- A = nx.nx_agraph.to_agraph(G)
- def test_view_pygraphviz_no_added_attrs_to_input(self):
- G = nx.complete_graph(2)
- path, A = nx.nx_agraph.view_pygraphviz(G, show=False)
- assert G.graph == {}
- @pytest.mark.xfail(reason="known bug in clean_attrs")
- def test_view_pygraphviz_leaves_input_graph_unmodified(self):
- G = nx.complete_graph(2)
- # Add entries to graph dict that to_agraph handles specially
- G.graph["node"] = {"width": "0.80"}
- G.graph["edge"] = {"fontsize": "14"}
- path, A = nx.nx_agraph.view_pygraphviz(G, show=False)
- assert G.graph == {"node": {"width": "0.80"}, "edge": {"fontsize": "14"}}
- def test_graph_with_AGraph_attrs(self):
- G = nx.complete_graph(2)
- # Add entries to graph dict that to_agraph handles specially
- G.graph["node"] = {"width": "0.80"}
- G.graph["edge"] = {"fontsize": "14"}
- path, A = nx.nx_agraph.view_pygraphviz(G, show=False)
- # Ensure user-specified values are not lost
- assert dict(A.node_attr)["width"] == "0.80"
- assert dict(A.edge_attr)["fontsize"] == "14"
- def test_round_trip_empty_graph(self):
- G = nx.Graph()
- A = nx.nx_agraph.to_agraph(G)
- H = nx.nx_agraph.from_agraph(A)
- # assert graphs_equal(G, H)
- AA = nx.nx_agraph.to_agraph(H)
- HH = nx.nx_agraph.from_agraph(AA)
- assert graphs_equal(H, HH)
- G.graph["graph"] = {}
- G.graph["node"] = {}
- G.graph["edge"] = {}
- assert graphs_equal(G, HH)
- @pytest.mark.xfail(reason="integer->string node conversion in round trip")
- def test_round_trip_integer_nodes(self):
- G = nx.complete_graph(3)
- A = nx.nx_agraph.to_agraph(G)
- H = nx.nx_agraph.from_agraph(A)
- assert graphs_equal(G, H)
- def test_graphviz_alias(self):
- G = self.build_graph(nx.Graph())
- pos_graphviz = nx.nx_agraph.graphviz_layout(G)
- pos_pygraphviz = nx.nx_agraph.pygraphviz_layout(G)
- assert pos_graphviz == pos_pygraphviz
- @pytest.mark.parametrize("root", range(5))
- def test_pygraphviz_layout_root(self, root):
- # NOTE: test depends on layout prog being deterministic
- G = nx.complete_graph(5)
- A = nx.nx_agraph.to_agraph(G)
- # Get layout with root arg is not None
- pygv_layout = nx.nx_agraph.pygraphviz_layout(G, prog="circo", root=root)
- # Equivalent layout directly on AGraph
- A.layout(args=f"-Groot={root}", prog="circo")
- # Parse AGraph layout
- a1_pos = tuple(float(v) for v in dict(A.get_node("1").attr)["pos"].split(","))
- assert pygv_layout[1] == a1_pos
- def test_2d_layout(self):
- G = nx.Graph()
- G = self.build_graph(G)
- G.graph["dimen"] = 2
- pos = nx.nx_agraph.pygraphviz_layout(G, prog="neato")
- pos = list(pos.values())
- assert len(pos) == 5
- assert len(pos[0]) == 2
- def test_3d_layout(self):
- G = nx.Graph()
- G = self.build_graph(G)
- G.graph["dimen"] = 3
- pos = nx.nx_agraph.pygraphviz_layout(G, prog="neato")
- pos = list(pos.values())
- assert len(pos) == 5
- assert len(pos[0]) == 3
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